ipcef1 interaction protein for cytohesin exchange factors 1 [Danio rerio (zebrafish)] - Gene

Summary

Official Symbol: ipcef1provided by ZNC
Official Full Name: interaction protein for cytohesin exchange factors 1provided by ZNC
Primary source: ZFIN:ZDB-GENE-060929-172
See related: Ensembl:ENSDARG00000099252 AllianceGenome:ZFIN:ZDB-GENE-060929-172
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Danio rerio
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
Also known as: zgc:154018
Summary: Orthologous to human IPCEF1 (interaction protein for cytohesin exchange factors 1). [provided by Alliance of Genome Resources, Nov 2024]
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 20

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
RS_2024_08	current	GRCz11 (GCF_000002035.6)	20	NC_007131.7 (4221978..4248785)
105	previous assembly	GRCz10 (GCF_000002035.5)	20	NC_007131.6 (4505901..4513710)
105	previous assembly	GRCz10 (GCF_000002035.5)	Unplaced Scaffold	NW_008805360.1 (1141..18041, complement)

Chromosome 20 - NC_007131.7 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Expression

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See details

Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
BioProject: PRJEB1986
Analysis date: Fri Dec 8 19:48:10 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by ZFIN

Function	Evidence Code	Pubs
enables molecular_function	ND No biological Data available more info

Process	Evidence Code	Pubs
involved_in biological_process	ND No biological Data available more info

Component	Evidence Code	Pubs
is_active_in cellular_component	ND No biological Data available more info

General protein information

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Preferred Names: interactor protein for cytohesin exchange factors 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001076758.1 → NP_001070226.1 interactor protein for cytohesin exchange factors 1

See identical proteins and their annotated locations for NP_001070226.1

Status: PROVISIONAL

Source sequence(s)

BC124514

UniProtKB/TrEMBL

Q08BX7

Related

ENSDARP00000133499.2, ENSDART00000171898.2

Conserved Domains (2) summary

cd01260
Location:2 → 115

PH_CNK_mammalian-like; Connector enhancer of KSR (Kinase suppressor of ras) (CNK) pleckstrin homology (PH) domain

pfam00169
Location:16 → 111

PH; PH domain