TNPO1 transportin 1 [Bos taurus (domestic cattle)] - Gene

Summary

Official Symbol: TNPO1provided by VGNC
Official Full Name: transportin 1provided by VGNC
Primary source: VGNC:VGNC:36199
See related: Ensembl:ENSBTAG00000007979
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as: TRN; KPNB2
Orthologs: human mouse all
NEW: Try the new Gene table
Try the new Transcript table

Genomic context

Location:: chromosome: 20

Exon count:: 26

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	20	NC_037347.1 (8722813..8816681, complement)

Chromosome 20 - NC_037347.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to reference sequence details

Genomic Sequence:: NC_037347.1 Chromosome 20 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the page Help

GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables nuclear import signal receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables nuclear localization sequence binding	IEA Inferred from Electronic Annotation more info	PubMed
enables small GTPase binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein import into nucleus	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info	PubMed
located_in nucleus	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

Go to the top of the page Help

Preferred Names: transportin-1

Names: importin beta-2; karyopherin (importin) beta 2; karyopherin beta-2

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001076540.1 → NP_001070008.1 transportin-1

See identical proteins and their annotated locations for NP_001070008.1

Status: PROVISIONAL

Source sequence(s)

BC103374

UniProtKB/TrEMBL

A0A3Q1MP13

Related

ENSBTAP00000010491.6, ENSBTAT00000010491.7

Conserved Domains (2) summary

COG5215
Location:24 → 759

KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]

sd00044
Location:95 → 116

HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

NC_037347.1 Reference ARS-UCD2.0 Primary Assembly

Range

8722813..8816681 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_024981409.2 → XP_024837177.1 transportin-1 isoform X2

UniProtKB/TrEMBL

A0A3Q1MP13

Related

ENSBTAP00000073075.2, ENSBTAT00000076134.2

Conserved Domains (2) summary

COG5215
Location:32 → 741

KAP95; Karyopherin (importin) beta [Intracellular trafficking and secretion]

sd00044
Location:103 → 124

HEAT; HEAT repeat [structural motif]
XM_059878803.1 → XP_059734786.1 transportin-1 isoform X1
XM_059878802.1 → XP_059734785.1 transportin-1 isoform X1