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AP3B1 adaptor related protein complex 3 subunit beta 1 [ Bos taurus (domestic cattle) ]

Gene ID: 767602, updated on 10-Oct-2024

Summary

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Official Symbol
AP3B1provided by VGNC
Official Full Name
adaptor related protein complex 3 subunit beta 1provided by VGNC
Primary source
VGNC:VGNC:25987
See related
BGD:BT19788; Ensembl:ENSBTAG00000005016
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See AP3B1 in Genome Data Viewer
Location:
chromosome: 10
Exon count:
29
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 10 NC_037337.1 (9099553..9335423, complement)

Chromosome 10 - NC_037337.1Genomic Context describing neighboring genes Neighboring gene tubulin folding cofactor A Neighboring gene ataxin-3 Neighboring gene microRNA mir-2284z-1 Neighboring gene microRNA mir-2285v Neighboring gene secretory carrier membrane protein 1 Neighboring gene LHFPL tetraspan subfamily member 2 Neighboring gene uncharacterized LOC132346300

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037337.1 Chromosome 10 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. ADP-Ribosylation factor 1 (ARF1) regulates recruitment of the AP-3 adaptor complex to membranes. Ooi CE, et al. J Cell Biol, 1998 Jul 27. PMID 9679139, Free PMC Article
  2. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
  3. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  4. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of clathrin adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-3 complex subunit beta-1
Names
adapter-related protein complex 3 subunit beta-1
adaptor protein complex AP-3 beta-1 subunit
adaptor protein complex AP-3 subunit beta-1
adaptor related protein complex 3 beta 1 subunit
beta-3A-adaptin
beta3A-adaptin
clathrin assembly protein complex 3 beta-1 large chain

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001076534.1 → NP_001070002.1  AP-3 complex subunit beta-1

    See identical proteins and their annotated locations for NP_001070002.1

    Status: PROVISIONAL

    Source sequence(s)
    BC108129
    UniProtKB/Swiss-Prot
    Q32PG1
    UniProtKB/TrEMBL
    A0AAA9T073
    Related
    ENSBTAP00000006605.5, ENSBTAT00000006605.6
    Conserved Domains (5) summary
    pfam01602
    Location:46 → 585
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:128 → 251
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:804 → 948
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    pfam14797
    Location:708 → 771
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    sd00044
    Location:116 → 144
    HEAT; HEAT repeat [structural motif]

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037337.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    9099553..9335423 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010808844.3 → XP_010807146.1  AP-3 complex subunit beta-1 isoform X1

    UniProtKB/TrEMBL
    A0AAA9S692, A0AAA9T073
    Related
    ENSBTAP00000080726.1, ENSBTAT00000096427.1
    Conserved Domains (5) summary
    pfam01602
    Location:46 → 625
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:128 → 251
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:844 → 988
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    pfam14797
    Location:748 → 811
    SEEEED; Serine-rich region of AP3B1, clathrin-adaptor complex
    sd00044
    Location:116 → 144
    HEAT; HEAT repeat [structural motif]

  2. XM_059890677.1 → XP_059746660.1  AP-3 complex subunit beta-1 isoform X2

Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q32PG1.1 GenPept UniProtKB/Swiss-Prot:Q32PG1

Gene LinkOut

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