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1700122O11Rik RIKEN cDNA 1700122O11 gene [ Mus musculus (house mouse) ]

Gene ID: 76651, updated on 17-Aug-2024

Summary

Official Symbol
1700122O11Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700122O11 geneprovided by MGI
Primary source
MGI:MGI:1923901
See related
Ensembl:ENSMUSG00000094928 AllianceGenome:MGI:1923901
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 6.9) See more
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Genomic context

See 1700122O11Rik in Genome Data Viewer
Location:
17 C; 17 23.99 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 17 NC_000083.7 (48347554..48349113, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 17 NC_000083.6 (48036745..48038293, complement)

Chromosome 17 - NC_000083.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_42738 Neighboring gene predicted gene, 29938 Neighboring gene VISTA enhancer mm751 Neighboring gene predicted gene, 41591 Neighboring gene predicted gene, 30068 Neighboring gene RIKEN cDNA A730006G06 gene Neighboring gene predicted gene, 57493 Neighboring gene heat shock protein 1 (chaperonin) pseudogene 22 Neighboring gene RIKEN cDNA 1700067P10 gene

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_185296.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    MF597744
    Related
    ENSMUST00000178823.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000083.7 Reference GRCm39 C57BL/6J

    Range
    48347554..48349113 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_029689.1: Suppressed sequence

    Description
    NM_029689.1: This RefSeq was removed because it is now thought that this gene does encode a protein.