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Krtap4-7 keratin associated protein 4-7 [ Mus musculus (house mouse) ]

Gene ID: 76444, updated on 2-Nov-2024

Summary

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Official Symbol
Krtap4-7provided by MGI
Official Full Name
keratin associated protein 4-7provided by MGI
Primary source
MGI:MGI:1923694
See related
Ensembl:ENSMUSG00000045109 AllianceGenome:MGI:1923694
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
KAP4.7; KRTAP4.7; 2310037K05Rik
Summary
Orthologous to several human genes including KRTAP4-12 (keratin associated protein 4-12) and KRTAP4-7 (keratin associated protein 4-7). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See Krtap4-7 in Genome Data Viewer
Location:
11 D; 11 62.99 cM
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 11 NC_000077.7 (99533938..99534915, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 11 NC_000077.6 (99643112..99644089, complement)

Chromosome 11 - NC_000077.7Genomic Context describing neighboring genes Neighboring gene predicted gene, 32730 Neighboring gene keratin associated protein 4-1 Neighboring gene keratin associated protein 4-2 Neighboring gene keratin associated protein 4-24 Neighboring gene STARR-seq mESC enhancer starr_30707 Neighboring gene keratin associated protein 4-25

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Molecular evolution of the keratin associated protein gene family in mammals, role in the evolution of mammalian hair. Wu DD, et al. BMC Evol Biol, 2008 Aug 23. PMID 18721477, Free PMC Article
  2. A high-resolution anatomical atlas of the transcriptome in the mouse embryo. Diez-Roux G, et al. PLoS Biol, 2011 Jan 18. PMID 21267068, Free PMC Article
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (10) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

General protein information

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Preferred Names
keratin-associated protein 4-6

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_029613.1 → NP_083889.1  keratin-associated protein 4-6

    See identical proteins and their annotated locations for NP_083889.1

    Status: PROVISIONAL

    Source sequence(s)
    AK009665
    Consensus CDS
    CCDS25393.1
    UniProtKB/TrEMBL
    Q9D732
    Related
    ENSMUSP00000053711.6, ENSMUST00000055121.7
    Conserved Domains (2) summary
    pfam01500
    Location:3 → 167
    Keratin_B2; Keratin, high sulfur B2 protein
    pfam13885
    Location:54 → 98
    Keratin_B2_2; Keratin, high sulfur B2 protein

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000077.7 Reference GRCm39 C57BL/6J

    Range
    99533938..99534915 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_036157061.1 → XP_036012954.1  keratin-associated protein 4-6 isoform X1

    Conserved Domains (1) summary
    pfam01500
    Location:3 → 147
    Keratin_B2; Keratin, high sulfur B2 protein
Nucleotide Protein Strain
Heading Accession and Version

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