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kptn kaptin, actin binding protein [ Strongylocentrotus purpuratus (purple sea urchin) ]

Gene ID: 762998, updated on 17-Aug-2024

Summary

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Symbol
kptn
Full Name
kaptin, actin binding protein
Primary source
EchinoBase:ECB-GENE-23153465
Gene type
protein coding
RefSeq status
MODEL
Organism
Strongylocentrotus purpuratus
Lineage
Eukaryota; Metazoa; Echinodermata; Eleutherozoa; Echinozoa; Echinoidea; Euechinoidea; Echinacea; Camarodonta; Echinidea; Strongylocentrotidae; Strongylocentrotus
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Genomic context

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See kptn in Genome Data Viewer
Location:
chromosome: Un
Exon count:
12
Annotation release Status Assembly Chr Location
102 current Spur_5.0 (GCF_000002235.5) Unplaced Scaffold NW_022145611.1 (33773088..33791862)
Build 3.1 previous assembly Spur_3.1 (GCF_000002235.3) Unplaced Scaffold NW_003578918.1 (127335..138407, complement)

NW_022145611.1Genomic Context describing neighboring genes Neighboring gene spastin Neighboring gene partner of NOB1 homolog Neighboring gene uncharacterized LOC577789 Neighboring gene aftiphilin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin filament binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in actin filament organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cellular response to amino acid starvation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of TORC1 signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of KICSTOR complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in actin cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lamellipodium IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
KICSTOR complex protein kaptin
Names
kaptin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Strongylocentrotus purpuratus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Spur_5.0 Primary Assembly

Genomic

  1. NW_022145611.1 Reference Spur_5.0 Primary Assembly

    Range
    33773088..33791862
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_030999541.1 → XP_030855401.1  KICSTOR complex protein kaptin

    UniProtKB/TrEMBL
    A0A7M7PRL5
    Conserved Domains (1) summary
    pfam12894
    Location:166 → 249
    ANAPC4_WD40; Anaphase-promoting complex subunit 4 WD40 domain
Nucleotide Protein
Heading Accession and Version

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