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Tmem150cos transmembrane protein 150C, opposite strand [ Mus musculus (house mouse) ]

Gene ID: 76003, updated on 17-Aug-2024

Summary

Official Symbol
Tmem150cosprovided by MGI
Official Full Name
transmembrane protein 150C, opposite strandprovided by MGI
Primary source
MGI:MGI:1923253
See related
Ensembl:ENSMUSG00000086259 AllianceGenome:MGI:1923253
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
5830403M04Rik
Expression
Biased expression in genital fat pad adult (RPKM 1.9), CNS E18 (RPKM 1.0) and 9 other tissues See more
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Genomic context

See Tmem150cos in Genome Data Viewer
Location:
5 E4; 5 48.46 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (100225821..100243132)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (100077962..100095273)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930524J08 gene Neighboring gene heterogeneous nuclear ribonucleoprotein D Neighboring gene STARR-seq mESC enhancer starr_13719 Neighboring gene STARR-positive B cell enhancer ABC_E2161 Neighboring gene STARR-seq mESC enhancer starr_13720 Neighboring gene heterogeneous nuclear ribonucleoprotein D-like Neighboring gene enolase-phosphatase 1 Neighboring gene STARR-positive B cell enhancer ABC_E8822 Neighboring gene transmembrane protein 150C Neighboring gene predicted gene, 36167 Neighboring gene RIKEN cDNA 2310034O05 gene Neighboring gene predicted gene, 36304

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Other Names

  • Tmem150c opposite strand transcript

Clone Names

  • AC124480.3

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045993.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC124480
    Related
    ENSMUST00000143245.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    100225821..100243132
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_175230.2: Suppressed sequence

    Description
    NM_175230.2: This RefSeq record was removed by NCBI staff. Contact info@ncbi.nlm.nih.gov for further information.