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4930471M09Rik RIKEN cDNA 4930471M09 gene [ Mus musculus (house mouse) ]

Gene ID: 75787, updated on 17-Aug-2024

Summary

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Official Symbol
4930471M09Rikprovided by MGI
Official Full Name
RIKEN cDNA 4930471M09 geneprovided by MGI
Primary source
MGI:MGI:1922150
See related
Ensembl:ENSMUSG00000121651 AllianceGenome:MGI:1922150
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
4930427C17Rik
Expression
Biased expression in testis adult (RPKM 2.0) and whole brain E14.5 (RPKM 0.1) See more
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Genomic context

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See 4930471M09Rik in Genome Data Viewer
Location:
6 D1; 6 40.5 cM
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 6 NC_000072.7 (91407442..91417836, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 6 NC_000072.6 (91430460..91440854, complement)

Chromosome 6 - NC_000072.7Genomic Context describing neighboring genes Neighboring gene vomeronasal 1 receptor, pseudogene 35 Neighboring gene vomeronasal 1 receptor, pseudogene 36 Neighboring gene glyceraldehyde-3-phosphate dehydrogenase pseudogene Neighboring gene RIKEN cDNA 1810044D09 gene Neighboring gene STARR-positive B cell enhancer ABC_E8117 Neighboring gene coiled-coil-helix-coiled-coil-helix domain containing 4 Neighboring gene STARR-seq mESC enhancer starr_16640

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045980.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC161456, AK015554
    Related
    ENSMUST00000181849.2

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000072.7 Reference GRCm39 C57BL/6J

    Range
    91407442..91417836 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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