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thpR RNA 2',3'-cyclic phosphodiesterase [ Shigella boydii ]

Gene ID: 75202038, updated on 1-Aug-2024

Summary

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Gene symbol
thpR
Gene description
RNA 2',3'-cyclic phosphodiesterase
Locus tag
CEH00_RS00440
Gene type
protein coding
Organism
Shigella boydii (strain: ESBL-W3-2, nat-host: Homo sapiens)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Shigella
Old locus tag
CEH00_00440
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Genomic context

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NZ_NIYS01000002.1Genomic Context describing neighboring genes Neighboring gene bifunctional glycosyl transferase/transpeptidase Neighboring gene ATP-dependent helicase HrpB Neighboring gene DNA/RNA nuclease SfsA Neighboring gene RNA polymerase-binding protein DksA

Genomic regions, transcripts, and products

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Genomic Sequence:
NZ_NIYS01000002.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
RNA 2',3'-cyclic phosphodiesterase
WP_001294700.1

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NZ_NIYS01000002.1 Reference assembly

    Range
    53335..53865
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_001294700.1 MULTISPECIES: RNA 2',3'-cyclic phosphodiesterase [Enterobacteriaceae]

    See identical proteins and their annotated locations for WP_001294700.1

    UniProtKB/Swiss-Prot
    P37025, Q8KJQ1
    UniProtKB/TrEMBL
    A0A037Y8B0, A0A0E0Y548, A0A0I3AHQ9, A0A1X3JN14, A0A2A2XQ85, A0A398QPB8, A0A6H2GIC9, A0A7M3S294, A0A7U9J0Q4, A0A7Z1EKW4, A0A836ZBW8, A0A9P2I5Y6, A0AA35AFD4, A0AAD0NS34, A0AAD2UBC7, A0AAD2V968, A0AAD2VDW1, A0AAJ3ZIN2, A7ZHN8, B7LGK9, E1J612
    Conserved Domains (1) summary
    PRK15124
    Location:1 → 176
    PRK15124; RNA 2',3'-cyclic phosphodiesterase
Nucleotide Protein
Heading Accession and Version