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GJB6 gap junction protein beta 6 [ Pan troglodytes (chimpanzee) ]

Gene ID: 750343, updated on 17-Aug-2024

Summary

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Official Symbol
GJB6provided by VGNC
Official Full Name
gap junction protein beta 6provided by VGNC
Primary source
VGNC:VGNC:5062
Locus tag
CK820_G0032643
See related
Ensembl:ENSPTRG00000005683
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CXNF
Orthologs
human mouse all
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Genomic context

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See GJB6 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 14 NC_072412.2 (19433086..19443368, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 13 NC_072411.1 (14199024..14209305, complement)

Chromosome 14 - NC_072412.2Genomic Context describing neighboring genes Neighboring gene gap junction protein alpha 3 Neighboring gene gap junction protein beta 2 Neighboring gene crystallin lambda 1 Neighboring gene uncharacterized LOC129136716

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables gap junction channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-cell signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in gap junction-mediated intercellular transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of connexin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
gap junction beta-6 protein
Names
connexin F
gap junction protein, beta 6, 30kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072412.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    19433086..19443368 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003314064.2 → XP_003314112.1  gap junction beta-6 protein isoform X1

    See identical proteins and their annotated locations for XP_003314112.1

    UniProtKB/TrEMBL
    A0A2J8QEL3, A0A654IBY5
    Conserved Domains (1) summary
    pfam00029
    Location:2 → 215
    Connexin

  2. XM_001173938.3 → XP_001173938.2  gap junction beta-6 protein isoform X1

    See identical proteins and their annotated locations for XP_001173938.2

    UniProtKB/TrEMBL
    A0A2J8QEL3, A0A654IBY5
    Conserved Domains (1) summary
    pfam00029
    Location:2 → 215
    Connexin

  3. XM_003314063.2 → XP_003314111.1  gap junction beta-6 protein isoform X1

    See identical proteins and their annotated locations for XP_003314111.1

    UniProtKB/TrEMBL
    A0A2J8QEL3, A0A654IBY5
    Conserved Domains (1) summary
    pfam00029
    Location:2 → 215
    Connexin

  4. XM_016925022.4 → XP_016780511.1  gap junction beta-6 protein isoform X2

    UniProtKB/TrEMBL
    H2R0Q7
    Related
    ENSPTRP00000041093.5

  5. XM_003314062.6 → XP_003314110.1  gap junction beta-6 protein isoform X1

    See identical proteins and their annotated locations for XP_003314110.1

    UniProtKB/TrEMBL
    A0A2J8QEL3, A0A654IBY5
    Conserved Domains (1) summary
    pfam00029
    Location:2 → 215
    Connexin

  6. XM_054664847.2 → XP_054520822.1  gap junction beta-6 protein isoform X2

    UniProtKB/TrEMBL
    H2R0Q7
Nucleotide Protein
Heading Accession and Version

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