U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC7498218 UDP-arabinopyranose mutase 3 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7498218, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC7498218
Gene description
UDP-arabinopyranose mutase 3
Locus tag
POPTR_008G097600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC7498218 in Genome Data Viewer
Location:
chromosome: 8
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 8 NC_037292.2 (6075746..6079116)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 8 NC_037292.1 (6095165..6098468)

Chromosome 8 - NC_037292.2Genomic Context describing neighboring genes Neighboring gene folate synthesis bifunctional protein, mitochondrial Neighboring gene uncharacterized LOC7471069 Neighboring gene uncharacterized LOC7471070 Neighboring gene transfer RNA aspartic acid (anticodon GUC) Neighboring gene protein CRABS CLAW

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables UDP-arabinopyranose mutase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in UDP-L-arabinose metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
UDP-arabinopyranose mutase 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037292.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    6075746..6079116
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002311314.4 → XP_002311350.1  UDP-arabinopyranose mutase 3

    See identical proteins and their annotated locations for XP_002311350.1

    UniProtKB/TrEMBL
    A9PD77, B9HIG2
    Conserved Domains (1) summary
    PLN03180
    Location:4 → 348
    PLN03180; reversibly glycosylated polypeptide; Provisional
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials