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LOC7498090 basic endochitinase CHB4 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7498090, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7498090
Gene description
basic endochitinase CHB4
Locus tag
POPTR_019G094100v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7498090 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
3
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 19 NC_037303.2 (13088224..13114233, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 19 NC_037303.1 (12414641..12415860, complement)

Chromosome 19 - NC_037303.2Genomic Context describing neighboring genes Neighboring gene endochitinase EP3 Neighboring gene endochitinase PR4 Neighboring gene endochitinase EP3 Neighboring gene endochitinase PR4 Neighboring gene probable LRR receptor-like serine/threonine-protein kinase At1g51810 Neighboring gene receptor-like protein kinase At3g21340

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell wall macromolecule catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in chitin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
basic endochitinase CHB4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037303.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    13088224..13114233 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002326006.4 → XP_002326042.2  basic endochitinase CHB4

Nucleotide Protein
Heading Accession and Version

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