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LOC7481523 laccase-2 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7481523, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7481523
Gene description
laccase-2
Locus tag
POPTR_009G034500v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
Also known as
Lac22
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Genomic context

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See LOC7481523 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
6
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 9 NC_037293.2 (4476108..4478975, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 9 NC_037293.1 (4445230..4448096, complement)

Chromosome 9 - NC_037293.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC112328652 Neighboring gene small polypeptide DEVIL 13 Neighboring gene zinc transporter 1 Neighboring gene E3 ubiquitin-protein ligase SDIR1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
laccase-2
Names
laccase 22

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037293.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    4476108..4478975 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002313388.4 → XP_002313424.1  laccase-2

    See identical proteins and their annotated locations for XP_002313424.1

    UniProtKB/TrEMBL
    A0A2K1Z8I1, B9HPE5
    Conserved Domains (1) summary
    TIGR03389
    Location:36 → 576
    laccase; plant
Nucleotide Protein
Heading Accession and Version

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