U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC7481434 pleiotropic drug resistance protein 3 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7481434, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC7481434
Gene description
pleiotropic drug resistance protein 3
Locus tag
POPTR_002G188900v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC7481434 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
24
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 2 NC_037286.2 (15086778..15096533, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 2 NC_037286.1 (14865690..14875291, complement)

Chromosome 2 - NC_037286.2Genomic Context describing neighboring genes Neighboring gene squamosa promoter-binding-like protein 1 Neighboring gene aspartic proteinase CDR1-like Neighboring gene S-adenosylmethionine synthase 1-like Neighboring gene uncharacterized LOC7460491 Neighboring gene chlorophyll a-b binding protein of LHCII type 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
pleiotropic drug resistance protein 3

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037286.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    15086778..15096533 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_024595066.2 → XP_024450834.2  pleiotropic drug resistance protein 3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials