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CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit X [ Pan troglodytes (chimpanzee) ]

Gene ID: 748057, updated on 17-Aug-2024

Summary

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Official Symbol
CLPXprovided by VGNC
Official Full Name
caseinolytic mitochondrial matrix peptidase chaperone subunit Xprovided by VGNC
Primary source
VGNC:VGNC:2476
Locus tag
CK820_G0008293
See related
Ensembl:ENSPTRG00000007176
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CLPX in Genome Data Viewer
Location:
chromosome: 16
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 16 NC_072414.2 (57137848..57176365, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 15 NC_072413.1 (57112706..57151218, complement)

Chromosome 16 - NC_072414.2Genomic Context describing neighboring genes Neighboring gene ubiquitin associated protein 1 like Neighboring gene programmed cell death 7 Neighboring gene cartilage intermediate layer protein Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP-dependent protein folding chaperone IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteolysis involved in protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial matrix IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial
Names
ClpX caseinolytic peptidase X homolog
ClpX caseinolytic protease X homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    57137848..57176365 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001174382.8 → XP_001174382.2  ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2I3TDN3, A0A2J8NRE9, A0A803KLD8, K7BTN0
    Conserved Domains (2) summary
    PRK05342
    Location:172 → 608
    clpX; ATP-dependent protease ATP-binding subunit ClpX; Provisional
    cl02609
    Location:104 → 132
    Zn-ribbon; C-terminal zinc ribbon domain of RNA polymerase intrinsic transcript cleavage subunit

  2. XM_009429355.5 → XP_009427630.2  ATP-dependent Clp protease ATP-binding subunit clpX-like, mitochondrial isoform X2

    UniProtKB/TrEMBL
    H2Q9L9
    Conserved Domains (2) summary
    PRK05342
    Location:172 → 594
    clpX; ATP-dependent protease ATP-binding subunit ClpX; Provisional
    cl02609
    Location:104 → 132
    Zn-ribbon; C-terminal zinc ribbon domain of RNA polymerase intrinsic transcript cleavage subunit
Nucleotide Protein
Heading Accession and Version

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