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LOC7470550 mitochondrial arginine transporter BAC2 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7470550, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7470550
Gene description
mitochondrial arginine transporter BAC2
Locus tag
POPTR_001G182000v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7470550 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
2
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 1 NC_037285.2 (16075842..16078435)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 1 NC_037285.1 (15874488..15877153)

Chromosome 1 - NC_037285.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC7473039 Neighboring gene uncharacterized LOC127904266 Neighboring gene pyridoxal 5'-phosphate synthase-like subunit PDX1.2 Neighboring gene kinesin-like protein KIN-13B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037285.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    16075842..16078435
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002298179.4 → XP_002298215.1  mitochondrial arginine transporter BAC2

    See identical proteins and their annotated locations for XP_002298215.1

    UniProtKB/TrEMBL
    B9GFP3, B9GX17
    Conserved Domains (2) summary
    pfam00153
    Location:213 → 302
    Mito_carr; Mitochondrial carrier protein
    cl28162
    Location:31 → 93
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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