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LOC7467061 beta-amylase 1, chloroplastic [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7467061, updated on 23-Nov-2023

Summary

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Gene symbol
LOC7467061
Gene description
beta-amylase 1, chloroplastic
Locus tag
POPTR_001G087600v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
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Genomic context

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See LOC7467061 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
4
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 1 NC_037285.2 (6975498..6979290)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 1 NC_037285.1 (6932365..6936309)

Chromosome 1 - NC_037285.2Genomic Context describing neighboring genes Neighboring gene glutamine-dependent NAD(+) synthetase Neighboring gene luminal-binding protein 5 Neighboring gene protein KINESIN LIGHT CHAIN-RELATED 1 Neighboring gene protein NLP7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-amylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in polysaccharide catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-amylase 1, chloroplastic

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037285.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    6975498..6979290
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002297925.4 → XP_002297961.1  beta-amylase 1, chloroplastic

    See identical proteins and their annotated locations for XP_002297961.1

    UniProtKB/TrEMBL
    B9GL19
    Conserved Domains (1) summary
    cl27007
    Location:8 → 530
    PLN02905; beta-amylase
Nucleotide Protein
Heading Accession and Version

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