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MAPRE1 microtubule associated protein RP/EB family member 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 746655, updated on 17-Aug-2024

Summary

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Official Symbol
MAPRE1provided by VGNC
Official Full Name
microtubule associated protein RP/EB family member 1provided by VGNC
Primary source
VGNC:VGNC:14259
Locus tag
CK820_G0048891
See related
Ensembl:ENSPTRG00000013385
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MAPRE1 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 21 NC_072419.2 (39026424..39057325)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 20 NC_072418.1 (39058173..39089069)

Chromosome 21 - NC_072419.2Genomic Context describing neighboring genes Neighboring gene COMM domain containing 7 Neighboring gene DNA methyltransferase 3 beta Neighboring gene EF-hand calcium binding domain 8 Neighboring gene Sad1 and UNC84 domain containing 5

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables microtubule plus-end binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein localization to microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasmic microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule organizing center IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule plus-end IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle midzone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microtubule-associated protein RP/EB family member 1
Names
microtubule-associated protein RP/EB family member 1 pseudogene

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072419.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    39026424..39057325
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054674648.2 → XP_054530623.1  microtubule-associated protein RP/EB family member 1

    UniProtKB/TrEMBL
    H2R923, K7ARF5

  2. XM_054674647.2 → XP_054530622.1  microtubule-associated protein RP/EB family member 1

    UniProtKB/TrEMBL
    H2R923, K7ARF5

  3. XM_054674649.2 → XP_054530624.1  microtubule-associated protein RP/EB family member 1

    UniProtKB/TrEMBL
    H2R923, K7ARF5
Nucleotide Protein
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