U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC7460825 laccase-17 [ Populus trichocarpa (black cottonwood) ]

Gene ID: 7460825, updated on 23-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC7460825
Gene description
laccase-17
Locus tag
POPTR_011G120200v4
Gene type
protein coding
RefSeq status
MODEL
Organism
Populus trichocarpa
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Malpighiales; Salicaceae; Saliceae; Populus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC7460825 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
6
Annotation release Status Assembly Chr Location
102 current P.trichocarpa_v4.1 (GCF_000002775.5) 11 NC_037295.2 (15109205..15111908, complement)
101 previous assembly Pop_tri_v3 (GCF_000002775.4) 11 NC_037295.1 (14550375..14553037, complement)

Chromosome 11 - NC_037295.2Genomic Context describing neighboring genes Neighboring gene protein NRT1/ PTR FAMILY 8.3 Neighboring gene 3-deoxy-manno-octulosonate cytidylyltransferase, mitochondrial Neighboring gene small nucleolar RNA R71 Neighboring gene laccase-17

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables copper ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables hydroquinone:oxygen oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lignin catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in apoplast IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
laccase-17

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Populus trichocarpa Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference P.trichocarpa_v4.1 Primary Assembly

Genomic

  1. NC_037295.2 Reference P.trichocarpa_v4.1 Primary Assembly

    Range
    15109205..15111908 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_002317468.4 → XP_002317504.3  laccase-17

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials