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LPGAT1 lysophosphatidylglycerol acyltransferase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 745964, updated on 10-Oct-2024

Summary

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Official Symbol
LPGAT1provided by VGNC
Official Full Name
lysophosphatidylglycerol acyltransferase 1provided by VGNC
Primary source
VGNC:VGNC:1301
Locus tag
CK820_G0012701
See related
Ensembl:ENSPTRG00000001954
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See LPGAT1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (37280368..37366973)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (193954850..194043080, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene peptidyl-prolyl cis-trans isomerase NIMA-interacting 4-like Neighboring gene syncytin-1-like Neighboring gene uncharacterized LOC134808196 Neighboring gene uncharacterized LOC104004709

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol acyl-chain remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endomembrane system IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
acyl-CoA:lysophosphatidylglycerol acyltransferase 1
XP_001170154.1
XP_009439711.1
XP_024207449.1
XP_024207452.1
XP_024207455.1
XP_054514403.1
XP_063648563.1
XP_063648568.1
XP_063648572.1
XP_063648575.1
XP_063648596.1
XP_063648599.1
XP_063648600.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    37280368..37366973
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001170154.6 → XP_001170154.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X4

    See identical proteins and their annotated locations for XP_001170154.1

    UniProtKB/TrEMBL
    A0A2J8QVE4, A0A2J8QVF0, A0A6D2XP94, H2Q135
    Conserved Domains (2) summary
    cd07990
    Location:69 → 285
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:274 → 327
    Acyltransf_C; Acyltransferase C-terminus

  2. XM_063792502.1 → XP_063648572.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X2

  3. XM_054658428.2 → XP_054514403.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A2J8QVF0, A0A6D2XP94, H2Q135

  4. XM_063792505.1 → XP_063648575.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X2

  5. XM_024351687.3 → XP_024207455.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A2J8QVE4, A0A2J8QVF0, A0A6D2XP94, H2Q135
    Conserved Domains (2) summary
    cd07990
    Location:69 → 285
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:274 → 327
    Acyltransf_C; Acyltransferase C-terminus

  6. XM_024351681.3 → XP_024207449.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X3

    UniProtKB/TrEMBL
    A0A2J8QVE4
    Conserved Domains (2) summary
    cd07990
    Location:87 → 303
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:292 → 364
    Acyltransf_C; Acyltransferase C-terminus

  7. XM_063792530.1 → XP_063648600.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X2

  8. XM_063792529.1 → XP_063648599.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X5

  9. XM_009441436.5 → XP_009439711.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X4

    See identical proteins and their annotated locations for XP_009439711.1

    UniProtKB/TrEMBL
    A0A2J8QVE4, A0A2J8QVF0, A0A6D2XP94, H2Q135
    Related
    ENSPTRP00000003294.3
    Conserved Domains (2) summary
    cd07990
    Location:69 → 285
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:274 → 327
    Acyltransf_C; Acyltransferase C-terminus

  10. XM_024351684.3 → XP_024207452.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X4

    UniProtKB/TrEMBL
    A0A2J8QVE4, A0A2J8QVF0, A0A6D2XP94, H2Q135
    Conserved Domains (2) summary
    cd07990
    Location:69 → 285
    LPLAT_LCLAT1-like; Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: LCLAT1-like
    pfam16076
    Location:274 → 327
    Acyltransf_C; Acyltransferase C-terminus

  11. XM_063792526.1 → XP_063648596.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X5

  12. XM_063792493.1 → XP_063648563.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X1

  13. XM_063792498.1 → XP_063648568.1  acyl-CoA:lysophosphatidylglycerol acyltransferase 1 isoform X2

Nucleotide Protein
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