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AGR3 anterior gradient 3, protein disulphide isomerase family member [ Pan troglodytes (chimpanzee) ]

Gene ID: 742503, updated on 17-Aug-2024

Summary

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Official Symbol
AGR3provided by VGNC
Official Full Name
anterior gradient 3, protein disulphide isomerase family memberprovided by VGNC
Primary source
VGNC:VGNC:7209
Locus tag
CK820_G0021323
See related
Ensembl:ENSPTRG00000018954
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See AGR3 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (22657199..22679869, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (20430429..20453084, complement)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene tetraspanin 13 Neighboring gene anterior gradient 2, protein disulphide isomerase family member Neighboring gene cell cycle checkpoint protein RAD17-like Neighboring gene U6 snRNA-associated Sm-like protein LSm5 Neighboring gene uncharacterized LOC104007120 Neighboring gene aryl hydrocarbon receptor

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dystroglycan binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
anterior gradient protein 3
Names
anterior gradient 3 homolog
anterior gradient homolog 3
breast cancer membrane protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    22657199..22679869 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001149873.7 → XP_001149873.1  anterior gradient protein 3

    See identical proteins and their annotated locations for XP_001149873.1

    UniProtKB/TrEMBL
    A0A2J8MEK8, A0A2J8MEM1, A0A6D2WU47, H2QU79
    Conserved Domains (1) summary
    cd02960
    Location:37 → 166
    AGR; Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus. They are implicated in the formation of ...

  2. XM_009452703.5 → XP_009450978.1  anterior gradient protein 3

    See identical proteins and their annotated locations for XP_009450978.1

    UniProtKB/TrEMBL
    A0A2J8MEK8, A0A2J8MEM1, A0A6D2WU47, H2QU79
    Related
    ENSPTRP00000032380.2
    Conserved Domains (1) summary
    cd02960
    Location:37 → 166
    AGR; Anterior Gradient (AGR) family; members of this family are similar to secreted proteins encoded by the cement gland-specific genes XAG-1 and XAG-2, expressed in the anterior region of dorsal ectoderm of Xenopus. They are implicated in the formation of ...
Nucleotide Protein
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