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Gsdmcl1 gasdermin C-like 1 [ Mus musculus (house mouse) ]

Gene ID: 74236, updated on 22-Oct-2024

Summary

Official Symbol
Gsdmcl1provided by MGI
Official Full Name
gasdermin C-like 1provided by MGI
Primary source
MGI:MGI:1921486
See related
Ensembl:ENSMUSG00000121310 AllianceGenome:MGI:1921486
Gene type
pseudo
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Gsdmdc2; 1700022L20Rik
Expression
Restricted expression toward testis adult (RPKM 8.5) See more
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Genomic context

See Gsdmcl1 in Genome Data Viewer
Location:
15 D1; 15 27.96 cM
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 15 NC_000081.7 (63719158..63722791)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 15 NC_000081.6 (63847309..63850942)

Chromosome 15 - NC_000081.7Genomic Context describing neighboring genes Neighboring gene gasdermin pseudogene Neighboring gene gasdermin C2 Neighboring gene gasdermin C3 Neighboring gene gasdermin C-like 2

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_108051.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AK006248
    Related
    ENSMUST00000071847.10

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000081.7 Reference GRCm39 C57BL/6J

    Range
    63719158..63722791
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001167581.1: Suppressed sequence

    Description
    NM_001167581.1: This RefSeq was permanently suppressed because it is now thought that this gene is a pseudogene.