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1700016C19Rik RIKEN cDNA 1700016C19 gene [ Mus musculus (house mouse) ]

Gene ID: 74228, updated on 17-Aug-2024

Summary

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Official Symbol
1700016C19Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700016C19 geneprovided by MGI
Primary source
MGI:MGI:1921478
See related
AllianceGenome:MGI:1921478
Gene type
unknown
RefSeq status
MODEL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 7.5) See more

Genomic context

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See 1700016C19Rik in Genome Data Viewer
Location:
5; 5 F
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 5 NC_000071.7 (113497758..113504989)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 5 NC_000071.6 (113349892..113357123)

Chromosome 5 - NC_000071.7Genomic Context describing neighboring genes Neighboring gene STARR-seq mESC enhancer starr_14032 Neighboring gene microRNA 7229 Neighboring gene microRNA 7230 Neighboring gene activator of yeast meiotic promoters 1 Neighboring gene STARR-seq mESC enhancer starr_14038 Neighboring gene STARR-seq mESC enhancer starr_14039 Neighboring gene STARR-seq mESC enhancer starr_14040 Neighboring gene predicted gene, 30812

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Bibliography

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Related articles in PubMed

  1. Characterization of the piRNA complex from rat testes. Lau NC, et al. Science, 2006 Jul 21. PMID 16778019
  2. A germline-specific class of small RNAs binds mammalian Piwi proteins. Girard A, et al. Nature, 2006 Jul 13. PMID 16751776
  3. Antisense transcription in the mammalian transcriptome. Katayama S, et al. Science, 2005 Sep 2. PMID 16141073
  4. High-efficiency full-length cDNA cloning. Carninci P, et al. Methods Enzymol, 1999. PMID 10349636
  5. RIKEN integrated sequence analysis (RISA) system--384-format sequencing pipeline with 384 multicapillary sequencer. Shibata K, et al. Genome Res, 2000 Nov. PMID 11076861, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
  
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
  
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
  

NCBI Reference Sequences (RefSeq)

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NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000071.7 Reference GRCm39 C57BL/6J

    Range
    113497758..113504989
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_003955973.1 RNA Sequence

  2. XR_003955968.1 RNA Sequence

  3. XR_880601.3 RNA Sequence

  4. XR_003955967.1 RNA Sequence

  5. XR_003955969.1 RNA Sequence

  6. XR_003955972.1 RNA Sequence

  7. XR_003955970.1 RNA Sequence

  8. XR_003955971.1 RNA Sequence

  9. XR_880605.3 RNA Sequence

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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