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AP3B2 adaptor related protein complex 3 subunit beta 2 [ Pan troglodytes (chimpanzee) ]

Gene ID: 742189, updated on 17-Aug-2024

Summary

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Official Symbol
AP3B2provided by VGNC
Official Full Name
adaptor related protein complex 3 subunit beta 2provided by VGNC
Primary source
VGNC:VGNC:6442
Locus tag
CK820_G0049462
See related
Ensembl:ENSPTRG00000007381
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See AP3B2 in Genome Data Viewer
Location:
chromosome: 16
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 16 NC_072414.2 (75900991..75951054)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 15 NC_072413.1 (75875792..75925909)

Chromosome 16 - NC_072414.2Genomic Context describing neighboring genes Neighboring gene actin, cytoplasmic 2-like Neighboring gene uncharacterized LOC134808494 Neighboring gene serine/arginine-rich splicing factor 9-like Neighboring gene cytoplasmic polyadenylation element binding protein 1 Neighboring gene ribosomal protein S17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in anterograde synaptic vesicle transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of AP-3 adaptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of membrane coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AP-3 complex subunit beta-2
Names
adaptor related protein complex 3 beta 2 subunit

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072414.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    75900991..75951054
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001159946.4 → XP_001159946.1  AP-3 complex subunit beta-2 isoform X1

    UniProtKB/TrEMBL
    A0A2I3T691, A0A2J8JA28, A0A2J8JA54, A0A6D2VUY3, A0A6D2WKF4, H2Q9Z2
    Related
    ENSPTRP00000012613.4
    Conserved Domains (3) summary
    sd00044
    Location:111 → 139
    HEAT; HEAT repeat [structural motif]
    pfam01602
    Location:34 → 590
    Adaptin_N; Adaptin N terminal region
    pfam14796
    Location:803 → 947
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal

  2. XM_063794294.1 → XP_063650364.1  AP-3 complex subunit beta-2 isoform X3

    UniProtKB/TrEMBL
    A0A2I3ST16

  3. XM_009429698.5 → XP_009427973.1  AP-3 complex subunit beta-2 isoform X2

    UniProtKB/TrEMBL
    A0A2I3T691, A0A2J8JA54, A0A6D2WKF4
    Conserved Domains (4) summary
    pfam01602
    Location:8 → 511
    Adaptin_N; Adaptin N terminal region
    pfam12717
    Location:44 → 188
    Cnd1; non-SMC mitotic condensation complex subunit 1
    pfam14796
    Location:725 → 868
    AP3B1_C; Clathrin-adaptor complex-3 beta-1 subunit C-terminal
    sd00044
    Location:32 → 60
    HEAT; HEAT repeat [structural motif]

RNA

  1. XR_010151476.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases
Research Materials