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Crct1 cysteine-rich C-terminal 1 [ Mus musculus (house mouse) ]

Gene ID: 74175, updated on 2-Nov-2024

Summary

Official Symbol
Crct1provided by MGI
Official Full Name
cysteine-rich C-terminal 1provided by MGI
Primary source
MGI:MGI:1921425
See related
Ensembl:ENSMUSG00000027913 AllianceGenome:MGI:1921425
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
Nice-1; 2300002G24Rik
Summary
Is expressed in left lung and right lung. Orthologous to human CRCT1 (cysteine rich C-terminal 1). [provided by Alliance of Genome Resources, Nov 2024]
Expression
Restricted expression toward stomach adult (RPKM 190.6) See more
Orthologs
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Genomic context

See Crct1 in Genome Data Viewer
Location:
3 F1; 3 40.14 cM
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 3 NC_000069.7 (92921512..92922993, complement)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 3 NC_000069.6 (93014205..93015686, complement)

Chromosome 3 - NC_000069.7Genomic Context describing neighboring genes Neighboring gene late cornified envelope 3E Neighboring gene late cornified envelope 3F Neighboring gene late cornified envelope 1M Neighboring gene TD and POZ domain containing 8

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Targeted (1) 

General protein information

Preferred Names
cysteine-rich C-terminal protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_028798.3NP_083074.2  cysteine-rich C-terminal protein 1

    See identical proteins and their annotated locations for NP_083074.2

    Status: VALIDATED

    Source sequence(s)
    BY084236, CB202103
    Consensus CDS
    CCDS17578.1
    UniProtKB/TrEMBL
    Q6PAI5
    Related
    ENSMUSP00000029521.5, ENSMUST00000029521.5

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000069.7 Reference GRCm39 C57BL/6J

    Range
    92921512..92922993 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)