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LOC741747 interferon alpha-7 [ Pan troglodytes (chimpanzee) ]

Gene ID: 741747, updated on 29-Mar-2024

Summary

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Gene symbol
LOC741747
Gene description
interferon alpha-7
Locus tag
CK820_G0014516
See related
Ensembl:ENSPTRG00000044382
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
IFNA7; IF1AA6
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Genomic context

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See LOC741747 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (94707462..94708198)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (24160532..24161268, complement)

Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene interferon omega-1-like Neighboring gene interferon alpha-4 Neighboring gene interferon omega-1-like Neighboring gene interferon alpha-17

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cytokine receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in defense response IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
interferon alpha-7
Names
interferon 1AA6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    94707462..94708198
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001151819.6 → XP_001151819.2  interferon alpha-7

    UniProtKB/TrEMBL
    A0A2I3T730, A0A2J8QSG9
    Conserved Domains (1) summary
    pfam00143
    Location:26 → 181
    Interferon; Interferon alpha/beta domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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