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PTGR1 prostaglandin reductase 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 740274, updated on 18-Sep-2024

Summary

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Official Symbol
PTGR1provided by VGNC
Official Full Name
prostaglandin reductase 1provided by VGNC
Primary source
VGNC:VGNC:57733
Locus tag
CK820_G0027174
See related
Ensembl:ENSPTRG00000046148
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
LTB4DH
Orthologs
human mouse all
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Genomic context

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See PTGR1 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 11 NC_072409.2 (26870338..26908853)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 9 NC_072407.1 (91959865..91998367, complement)

Chromosome 11 - NC_072409.2Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC129136046 Neighboring gene DnaJ heat shock protein family (Hsp40) member C25 Neighboring gene zinc finger protein 483 Neighboring gene Ecm29 proteasome adaptor and scaffold Neighboring gene syncytin-1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 15-oxoprostaglandin 13-oxidase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 2-alkenal reductase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin reductase 1
Names
NADP-dependent leukotriene B4 12-hydroxydehydrogenase
leukotriene B4 12-hydroxydehydrogenase
XP_001148051.1
XP_001148123.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072409.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    26870338..26908853
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001148123.6 → XP_001148123.1  prostaglandin reductase 1

    See identical proteins and their annotated locations for XP_001148123.1

    UniProtKB/TrEMBL
    A0A2I3S9F2, A0A2J8LPC4, A0A6D2XP52, K7CF22
    Related
    ENSPTRP00000067313.1
    Conserved Domains (1) summary
    cl25577
    Location:4 → 328
    PKS_ER; Enoylreductase

  2. XM_001148051.7 → XP_001148051.1  prostaglandin reductase 1

    See identical proteins and their annotated locations for XP_001148051.1

    UniProtKB/TrEMBL
    A0A2I3S9F2, A0A2J8LPC4, A0A6D2XP52, K7CF22
    Related
    ENSPTRP00000073129.1
    Conserved Domains (1) summary
    cl25577
    Location:4 → 328
    PKS_ER; Enoylreductase
Nucleotide Protein
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