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HLAC_RS08985 DoxX family protein [ Halorubrum lacusprofundi ATCC 49239 ]

Gene ID: 7399685, updated on 22-Oct-2024

Summary

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Gene symbol
HLAC_RS08985
Gene description
DoxX family protein
Locus tag
HLAC_RS08985
Gene type
protein coding
Organism
Halorubrum lacusprofundi ATCC 49239 (strain: ATCC 49239, culture-collection: ATCC:49239, type-material: type strain of Halorubrum lacusprofundi)
Lineage
Archaea; Methanobacteriati; Methanobacteriota; Stenosarchaea group; Halobacteria; Halobacteriales; Haloferacaceae; Halorubrum
Old locus tag
Hlac_1811
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Genomic context

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Location:
chromosome: 1
Sequence:
Chromosome: 1; NC_012029.1 (1827158..1828258, complement)

Chromosome 1 - NC_012029.1Genomic Context describing neighboring genes Neighboring gene HAMP domain-containing sensor histidine kinase Neighboring gene replication factor C large subunit Neighboring gene tRNA-Pro Neighboring gene RNA-guided pseudouridylation complex pseudouridine synthase subunit Cbf5

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_012029.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Extremophilic models for astrobiology: haloarchaeal survival strategies and pigments for remote sensing. DasSarma S, et al. Extremophiles, 2020 Jan. PMID 31463573, Free PMC Article
  2. An Antarctic Extreme Halophile and Its Polyextremophilic Enzyme: Effects of Perchlorate Salts. Laye VJ, et al. Astrobiology, 2018 Apr. PMID 29189043, Free PMC Article
  3. Key amino acid residues conferring enhanced enzyme activity at cold temperatures in an Antarctic polyextremophilic β-galactosidase. Laye VJ, et al. Proc Natl Acad Sci U S A, 2017 Nov 21. PMID 29109294, Free PMC Article
  4. Amino acid substitutions in cold-adapted proteins from Halorubrum lacusprofundi, an extremely halophilic microbe from antarctica. Dassarma S, et al. PLoS One, 2013. PMID 23536799, Free PMC Article
  5. Cloning, overexpression, purification, and characterization of a polyextremophilic β-galactosidase from the Antarctic haloarchaeon Halorubrum lacusprofundi. Karan R, et al. BMC Biotechnol, 2013 Jan 16. PMID 23320757, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

General protein information

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Preferred Names
DoxX family protein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_012029.1 Reference assembly

    Range
    1827158..1828258 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. WP_015910526.1 DoxX family protein [Halorubrum lacusprofundi]

    See identical proteins and their annotated locations for WP_015910526.1

    UniProtKB/TrEMBL
    B9LPV2
    Conserved Domains (1) summary
    COG2259
    Location:222 → 355
    DoxX; Uncharacterized membrane protein YphA, DoxX/SURF4 family [Function unknown]
Nucleotide Protein
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