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CYP8B1 cytochrome P450 family 8 subfamily B member 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 736962, updated on 17-Aug-2024

Summary

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Official Symbol
CYP8B1provided by VGNC
Official Full Name
cytochrome P450 family 8 subfamily B member 1provided by VGNC
Primary source
VGNC:VGNC:6147
Locus tag
CK820_G0005317
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See CYP8B1 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (46879743..46883506, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (46879408..46883173, complement)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene HIG1 hypoxia inducible domain family member 1A Neighboring gene protein MIX23-like Neighboring gene atypical chemokine receptor 2 Neighboring gene uncharacterized LOC107970618 Neighboring gene heterogeneous nuclear ribonucleoprotein A1-like Neighboring gene zinc finger protein 662

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables iron ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables sterol 12-alpha-hydroxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    46879743..46883506 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001140682.7 → XP_001140682.2  7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase

    UniProtKB/TrEMBL
    A0A2J8PAY3, A0A2J8PAZ2, A0A6D2WB91, H2QMD8
    Conserved Domains (1) summary
    cl12078
    Location:41 → 493
    p450; Cytochrome P450
Nucleotide Protein
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