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MAN1C1 mannosidase alpha class 1C member 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 736491, updated on 10-Oct-2024

Summary

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Official Symbol
MAN1C1provided by VGNC
Official Full Name
mannosidase alpha class 1C member 1provided by VGNC
Primary source
VGNC:VGNC:8071
Locus tag
CK820_G0045704
See related
Ensembl:ENSPTRG00000000363
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See MAN1C1 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (205190333..205356408, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (25942165..26110451)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene aurora kinase A and ninein interacting protein Neighboring gene mitochondrial fission regulator 1 like Neighboring gene selenoprotein N Neighboring gene low density lipoprotein receptor adaptor protein 1 Neighboring gene macoilin 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannosyl-oligosaccharide 1,2-alpha-mannosidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mannose trimming involved in glycoprotein ERAD pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in extracellular exosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mannosyl-oligosaccharide 1,2-alpha-mannosidase IC
XP_016812058.1
XP_054520030.1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    205190333..205356408 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016956569.4 → XP_016812058.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X1

    UniProtKB/TrEMBL
    A0A2J8JNH4, A0A6D2XS21, K7CMV7, K7D0B4
    Related
    ENSPTRP00000077565.1
    Conserved Domains (1) summary
    pfam01532
    Location:181 → 617
    Glyco_hydro_47; Glycosyl hydrolase family 47

  2. XM_054664055.2 → XP_054520030.1  mannosyl-oligosaccharide 1,2-alpha-mannosidase IC isoform X2

    UniProtKB/TrEMBL
    A0A2J8JNH2
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials