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1700100L14Rik RIKEN cDNA 1700100L14 gene [ Mus musculus (house mouse) ]

Gene ID: 73584, updated on 22-Oct-2024

Summary

Official Symbol
1700100L14Rikprovided by MGI
Official Full Name
RIKEN cDNA 1700100L14 geneprovided by MGI
Primary source
MGI:MGI:1920834
See related
Ensembl:ENSMUSG00000101051 AllianceGenome:MGI:1920834
Gene type
ncRNA
RefSeq status
VALIDATED
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Expression
Restricted expression toward testis adult (RPKM 12.7) See more
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Genomic context

See 1700100L14Rik in Genome Data Viewer
Location:
13; 13 C1
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2024_02 current GRCm39 (GCF_000001635.27) 13 NC_000079.7 (70721360..70724223)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 13 NC_000079.6 (70573241..70576104)

Chromosome 13 - NC_000079.7Genomic Context describing neighboring genes Neighboring gene RIKEN cDNA 4930520P13 gene Neighboring gene predicted gene, 36216 Neighboring gene STARR-seq mESC enhancer starr_34952 Neighboring gene STARR-seq mESC enhancer starr_34953 Neighboring gene predicted gene, 36267 Neighboring gene STARR-seq mESC enhancer starr_34954 Neighboring gene STARR-seq mESC enhancer starr_34956 Neighboring gene interactor of little elongation complex ELL subunit 1 Neighboring gene CapStarr-seq enhancer MGSCv37_chr13:70776299-70776482 Neighboring gene predicted gene, 40996 Neighboring gene RIKEN cDNA D030007L05 gene Neighboring gene predicted gene, 36377

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

General gene information

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables molecular_function ND
No biological Data available
more info
 
Process Evidence Code Pubs
involved_in biological_process ND
No biological Data available
more info
 
Component Evidence Code Pubs
is_active_in cellular_component ND
No biological Data available
more info
 

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

RNA

  1. NR_045934.1 RNA Sequence

    Status: VALIDATED

    Source sequence(s)
    AC113508
    Related
    ENSMUST00000187681.8

RefSeqs of Annotated Genomes: GCF_000001635.27-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000079.7 Reference GRCm39 C57BL/6J

    Range
    70721360..70724223
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)