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MGC147117.S uncharacterized protein MGC147117 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 735202, updated on 4-Nov-2024

Summary

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Official Symbol
MGC147117.S
Official Full Name
uncharacterized protein MGC147117 S homeolog
Primary source
Xenbase:XB-GENE-5918161
Locus tag
XELAEV_18024753mg
See related
EnsemblRapid:ENSXLAG00005014056 AllianceGenome:Xenbase:XB-GENE-5918161
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Summary
Predicted to enable oxidoreductase activity. Predicted to be located in cytoplasm. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See MGC147117.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (30278066..30291371)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (29316651..29329961)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 170A S homeolog Neighboring gene agouti related neuropeptide S homeolog Neighboring gene uncharacterized LOC121393214 Neighboring gene uncharacterized LOC108715367 Neighboring gene zinc finger DHHC-type containing 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC131374

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables oxidoreductase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC735202

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096655.1 → NP_001090124.1  uncharacterized protein LOC735202

    See identical proteins and their annotated locations for NP_001090124.1

    Status: PREDICTED

    Source sequence(s)
    BC106599
    UniProtKB/TrEMBL
    A0A974CZH4, Q3KPR2
    Related
    ENSXLAP00005041492.1, ENSXLAT00005042433.1
    Conserved Domains (2) summary
    cd05325
    Location:9 → 251
    carb_red_sniffer_like_SDR_c; carbonyl reductase sniffer-like, classical (c) SDRs
    pfam00106
    Location:7 → 216
    adh_short; short chain dehydrogenase

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    30278066..30291371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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