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bet1.L Bet1 golgi vesicular membrane trafficking protein L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 735200, updated on 17-Aug-2024

Summary

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Official Symbol
bet1.L
Official Full Name
Bet1 golgi vesicular membrane trafficking protein L homeolog
Primary source
Xenbase:XB-GENE-17346645
Locus tag
XELAEV_18030873mg
See related
EnsemblRapid:ENSXLAG00005028211
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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Location:
chromosome: 6L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (32671598..32674958, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (30196093..30199453, complement)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene acyl-CoA dehydrogenase (3J649) L homeolog Neighboring gene guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 1 L homeolog Neighboring gene collagen type I alpha 2 L homeolog Neighboring gene uncharacterized LOC121394539

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC131356

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within protein transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC735200

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096653.1 → NP_001090122.1  uncharacterized protein LOC735200

    See identical proteins and their annotated locations for NP_001090122.1

    Status: PREDICTED

    Source sequence(s)
    BC106586
    UniProtKB/TrEMBL
    A0A974CLL4, Q3KPS2
    Related
    ENSXLAP00005083911.1, ENSXLAT00005085550.1
    Conserved Domains (1) summary
    cd15853
    Location:24 → 80
    SNARE_Bet1; SNARE motif of Bet1

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    32671598..32674958 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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