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cox18.L cytochrome c oxidase assembly factor COX18r L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 735188, updated on 4-Nov-2024

Summary

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Official Symbol
cox18.L
Official Full Name
cytochrome c oxidase assembly factor COX18r L homeolog
Primary source
Xenbase:XB-GENE-1008501
Locus tag
XELAEV_18005838mg
See related
EnsemblRapid:ENSXLAG00005032853 AllianceGenome:Xenbase:XB-GENE-1008501
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
cox18
Summary
Predicted to enable membrane insertase activity. Predicted to act upstream of or within mitochondrial cytochrome c oxidase assembly and protein insertion into mitochondrial inner membrane from matrix. Predicted to be located in mitochondrial inner membrane. Orthologous to human COX18 (cytochrome c oxidase assembly factor COX18). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See cox18.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
9
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (85651501..85665515)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (74738453..74752480)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene afamin Neighboring gene ankyrin repeat domain 17 L homeolog Neighboring gene ADAM metallopeptidase with thrombospondin type 1 motif 3 L homeolog Neighboring gene neuropeptide FF receptor 2 L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC131222

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables membrane insertase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within mitochondrial cytochrome c oxidase assembly IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein insertion into mitochondrial inner membrane from matrix IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrial inner membrane IEA
Inferred from Electronic Annotation
more info
  
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
cytochrome c oxidase assembly factor COX18r L homeolog
Names
COX18 cytochrome c oxidase assembly factor L homeolog
COX18 cytochrome c oxidase assembly homolog
cytochrome c oxidase assembly homolog 18

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096642.1 → NP_001090111.1  cytochrome c oxidase assembly factor COX18r L homeolog

    See identical proteins and their annotated locations for NP_001090111.1

    Status: PROVISIONAL

    Source sequence(s)
    BC106493
    UniProtKB/TrEMBL
    Q3B8F3
    Related
    ENSXLAP00005098439.1, ENSXLAT00005100258.1
    Conserved Domains (1) summary
    cl00489
    Location:69 → 351
    60KD_IMP; 60Kd inner membrane protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    85651501..85665515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018250788.2 → XP_018106277.1  cytochrome c oxidase assembly factor COX18r L homeolog isoform X3

    UniProtKB/TrEMBL
    A0A1L8HVD3, A0A974I3I6

  2. XM_018250773.2 → XP_018106262.1  cytochrome c oxidase assembly factor COX18r L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0ULV8
    Related
    ENSXLAP00005098525.1, ENSXLAT00005100350.1

  3. XM_018250793.2 → XP_018106282.1  cytochrome c oxidase assembly factor COX18r L homeolog isoform X3

    UniProtKB/TrEMBL
    A0A1L8HVD3, A0A974I3I6

  4. XM_018250781.2 → XP_018106270.1  cytochrome c oxidase assembly factor COX18r L homeolog isoform X2

    UniProtKB/TrEMBL
    A0A8J0UN64
    Related
    ENSXLAP00005098478.1, ENSXLAT00005100301.1
Nucleotide Protein Strain
Heading Accession and Version

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