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kcnk1.S potassium channel, two pore domain subfamily K, member 1 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 735178, updated on 4-Nov-2024

Summary

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Official Symbol
kcnk1.S
Official Full Name
potassium channel, two pore domain subfamily K, member 1 S homeolog
Primary source
Xenbase:XB-GENE-17345228
Locus tag
XELAEV_18046787mg
See related
EnsemblRapid:ENSXLAG00005014647 AllianceGenome:Xenbase:XB-GENE-17345228
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
twik1; k2p1.1; twik-1
Summary
Predicted to enable outward rectifier potassium channel activity and potassium ion leak channel activity. Predicted to act upstream of or within potassium ion transmembrane transport and stabilization of membrane potential. Predicted to be located in several cellular components, including perikaryon; recycling endosome; and synaptic membrane. Orthologous to human KCNK1 (potassium two pore domain channel subfamily K member 1). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See kcnk1.S in Genome Data Viewer
Location:
chromosome: 9_10S
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10S NC_054388.1 (43536413..43542887, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10S NC_030741.1 (36849285..36855759, complement)

Chromosome 9_10S - NC_054388.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 45B S homeolog Neighboring gene uncharacterized protein MGC114680 Neighboring gene fructosamine 3 kinase related protein S homeolog Neighboring gene tubulin folding cofactor D S homeolog Neighboring gene zinc finger protein 750 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC131037

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables outward rectifier potassium channel activity IEA
Inferred from Electronic Annotation
more info
  
enables potassium channel activity IEA
Inferred from Electronic Annotation
more info
  
enables potassium ion leak channel activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within potassium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within stabilization of membrane potential IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cell projection IEA
Inferred from Electronic Annotation
more info
  
located_in dendrite IEA
Inferred from Electronic Annotation
more info
  
located_in endosome IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
located_in perikaryon IEA
Inferred from Electronic Annotation
more info
  
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  
located_in recycling endosome IEA
Inferred from Electronic Annotation
more info
  
located_in synapse IEA
Inferred from Electronic Annotation
more info
  
located_in synaptic membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC735178

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096634.1 → NP_001090103.1  uncharacterized protein LOC735178

    See identical proteins and their annotated locations for NP_001090103.1

    Status: PREDICTED

    Source sequence(s)
    BC106404
    UniProtKB/TrEMBL
    A0A974BUD2, Q3KQ34
    Related
    ENSXLAP00005042873.1, ENSXLAT00005043941.1
    Conserved Domains (1) summary
    pfam07885
    Location:101 → 157
    Ion_trans_2; Ion channel

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054388.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    43536413..43542887 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

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