rnaseh1.L ribonuclease H1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: rnaseh1.L
Official Full Name: ribonuclease H1 L homeolog
Primary source: Xenbase:XB-GENE-1011888
See related: EnsemblRapid:ENSXLAG00005031719
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: rnh1; h1rna; rnaseh1; rnaseh1-a; rnaseh1-b
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Genomic context

Location:: chromosome: 5L

Exon count:: 10

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (145937080..145953855, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (134860113..134876908, complement)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables RNA-DNA hybrid ribonuclease activity	IEA Inferred from Electronic Annotation more info
enables endonuclease activity	IEA Inferred from Electronic Annotation more info
enables magnesium ion binding	IEA Inferred from Electronic Annotation more info
enables metal ion binding	IEA Inferred from Electronic Annotation more info
enables nucleic acid binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within DNA replication, removal of RNA primer	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: ribonuclease H1 L homeolog

NP_001090055.1

EC 3.1.26.4

XP_018117632.1

EC 3.1.26.4

XP_018117633.1

EC 3.1.26.4

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096586.1 → NP_001090055.1 ribonuclease H1 L homeolog

See identical proteins and their annotated locations for NP_001090055.1

Status: PROVISIONAL

Source sequence(s)

BC097857

UniProtKB/TrEMBL

Q4V7K6

Related

ENSXLAP00005095050.1, ENSXLAT00005096778.1

Conserved Domains (2) summary

cd09280
Location:146 → 287

RNase_HI_eukaryote_like; Eukaryotic RNase H is essential and is longer and more complex than their prokaryotic counterparts

pfam01693
Location:30 → 71

Cauli_VI; Caulimovirus viroplasmin

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

145937080..145953855 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)