mrps18a.L mitochondrial ribosomal protein S18A L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: mrps18a.L
Official Full Name: mitochondrial ribosomal protein S18A L homeolog
Primary source: Xenbase:XB-GENE-6254289
Locus tag: XELAEV_18026426mg
See related: EnsemblRapid:ENSXLAG00005027775
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: s18bmt; mrps18a; mrps18-3; mrp-s18-3
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Genomic context

Location:: chromosome: 5L

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (24622047..24625020, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (23814780..23817763, complement)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables small ribosomal subunit rRNA binding	IEA Inferred from Electronic Annotation more info
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within mitochondrial translation	IEA Inferred from Electronic Annotation more info
acts_upstream_of_or_within translation	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
part_of mitochondrial small ribosomal subunit	IEA Inferred from Electronic Annotation more info
part_of ribonucleoprotein complex	IEA Inferred from Electronic Annotation more info
located_in ribosome	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: mitochondrial ribosomal protein S18A L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096575.1 → NP_001090044.1 mitochondrial ribosomal protein S18A L homeolog

See identical proteins and their annotated locations for NP_001090044.1

Status: PROVISIONAL

Source sequence(s)

BC097747

UniProtKB/TrEMBL

A0A974CUG7, Q4V7S3

Related

ENSXLAP00005082563.1, ENSXLAT00005084199.1

Conserved Domains (1) summary

pfam01084
Location:77 → 127

Ribosomal_S18; Ribosomal protein S18

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

24622047..24625020 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)