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tp53i11.S tumor protein p53 inducible protein 11 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 735092, updated on 17-Aug-2024

Summary

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Official Symbol
tp53i11.S
Official Full Name
tumor protein p53 inducible protein 11 S homeolog
Primary source
Xenbase:XB-GENE-17340956
Locus tag
XELAEV_18024523mg
See related
EnsemblRapid:ENSXLAG00005023194
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See tp53i11.S in Genome Data Viewer
Location:
chromosome: 4S
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 4S NC_054378.1 (16354325..16381803, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 4S NC_030731.1 (15763059..15777495, complement)

Chromosome 4S - NC_054378.1Genomic Context describing neighboring genes Neighboring gene CD82 molecule S homeolog Neighboring gene tetraspanin 18 S homeolog Neighboring gene uncharacterized LOC108715265 Neighboring gene uncharacterized protein DDB_G0290685-like Neighboring gene uncharacterized LOC121403721

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC115301

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
uncharacterized protein LOC735092

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096551.1 → NP_001090020.1  uncharacterized protein LOC735092

    See identical proteins and their annotated locations for NP_001090020.1

    Status: PREDICTED

    Source sequence(s)
    BC094165
    UniProtKB/TrEMBL
    A0A974D071, Q52KW4
    Related
    ENSXLAP00005068446.1, ENSXLAT00005069979.1
    Conserved Domains (1) summary
    pfam14936
    Location:10 → 188
    p53-inducible11; tumor protein p53-inducible protein 11

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054378.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    16354325..16381803 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041591467.1 → XP_041447401.1  uncharacterized protein LOC735092 isoform X1

    UniProtKB/TrEMBL
    A0A974D071, Q52KW4
    Conserved Domains (1) summary
    pfam14936
    Location:10 → 188
    p53-inducible11; tumor protein p53-inducible protein 11

  2. XM_018259776.2 → XP_018115265.1  uncharacterized protein LOC735092 isoform X1

    UniProtKB/TrEMBL
    A0A974D071, Q52KW4
    Conserved Domains (1) summary
    pfam14936
    Location:10 → 188
    p53-inducible11; tumor protein p53-inducible protein 11

  3. XM_041591466.1 → XP_041447400.1  uncharacterized protein LOC735092 isoform X1

    UniProtKB/TrEMBL
    A0A974D071, Q52KW4
    Conserved Domains (1) summary
    pfam14936
    Location:10 → 188
    p53-inducible11; tumor protein p53-inducible protein 11
Nucleotide Protein Strain
Heading Accession and Version

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