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ankrd10.S ankyrin repeat domain 10 S homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734928, updated on 17-Aug-2024

Summary

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Official Symbol
ankrd10.S
Official Full Name
ankyrin repeat domain 10 S homeolog
Primary source
Xenbase:XB-GENE-999915
Locus tag
XELAEV_18015604mg
See related
EnsemblRapid:ENSXLAG00005026868
Gene type
protein coding
RefSeq status
MODEL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ankrd10
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Genomic context

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Location:
chromosome: 2S
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2S NC_054374.1 (107752049..107774744)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2S NC_030727.1 (98649398..98672803)

Chromosome 2S - NC_054374.1Genomic Context describing neighboring genes Neighboring gene SRY-box 1 S homeolog Neighboring gene Rho guanine nucleotide exchange factor 7 S homeolog Neighboring gene uncharacterized LOC121400658 Neighboring gene inhibitor of growth family member 1 S homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC131032

General protein information

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Preferred Names
ankyrin repeat domain 10 S homeolog; ankyrin repeat domain-containing protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054374.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    107752049..107774744
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041584252.1 → XP_041440186.1  ankyrin repeat domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A8J1MGH6
    Related
    ENSXLAP00005080272.1, ENSXLAT00005081865.1
    Conserved Domains (3) summary
    COG0666
    Location:55 → 185
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:55 → 87
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:20 → 76
    Ank_4; Ankyrin repeats (many copies)

  2. XM_041584254.1 → XP_041440188.1  ankyrin repeat domain-containing protein 10 isoform X3

    UniProtKB/TrEMBL
    A0A8J1MF76, Q32NM6
    Related
    ENSXLAP00005080337.1, ENSXLAT00005081930.1
    Conserved Domains (3) summary
    COG0666
    Location:15 → 126
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:71 → 102
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:74 → 125
    Ank_4; Ankyrin repeats (many copies)

  3. XM_041584251.1 → XP_041440185.1  ankyrin repeat domain-containing protein 10 isoform X1

    UniProtKB/TrEMBL
    A0A8J1MGH6
    Conserved Domains (3) summary
    COG0666
    Location:55 → 185
    ANKYR; Ankyrin repeat [Signal transduction mechanisms]
    sd00045
    Location:55 → 87
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:20 → 76
    Ank_4; Ankyrin repeats (many copies)

  4. XM_041584253.1 → XP_041440187.1  ankyrin repeat domain-containing protein 10 isoform X2

    UniProtKB/TrEMBL
    A0A1L8H8W9, A0A974DIR9
    Conserved Domains (2) summary
    sd00045
    Location:55 → 87
    ANK; ANK repeat [structural motif]
    pfam12796
    Location:60 → 153
    Ank_2; Ankyrin repeats (3 copies)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001096393.1: Suppressed sequence

    Description
    NM_001096393.1: This RefSeq was removed because it is a nonsense-mediated mRNA decay (NMD) candidate.
Nucleotide Protein Strain
Heading Accession and Version

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