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ikbke.L inhibitor of nuclear factor kappa B kinase subunit epsilon L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734896, updated on 18-Sep-2024

Summary

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Official Symbol
ikbke.L
Official Full Name
inhibitor of nuclear factor kappa B kinase subunit epsilon L homeolog
Primary source
Xenbase:XB-GENE-994612
Locus tag
XELAEV_18012204mg
See related
EnsemblRapid:ENSXLAG00005024951
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
ikbke
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Genomic context

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See ikbke.L in Genome Data Viewer
Location:
chromosome: 2L
Exon count:
22
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 2L NC_054373.1 (65979682..66014307, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 2L NC_030726.1 (63206771..63243539, complement)

Chromosome 2L - NC_054373.1Genomic Context describing neighboring genes Neighboring gene lamina-associated polypeptide 2 Neighboring gene Ras association domain family member 5 L homeolog Neighboring gene uncharacterized LOC121399950 Neighboring gene SLIT-ROBO Rho GTPase activating protein 2 L homeolog Neighboring gene family with sequence similarity 72 member A L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC130907

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
  
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
  
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within peptidyl-serine phosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within phosphorylation IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within protein phosphorylation IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
inhibitor of nuclear factor kappa B kinase subunit epsilon L homeolog
Names
inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon L homeolog
NP_001089830.1
XP_018100826.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096361.1 → NP_001089830.1  inhibitor of nuclear factor kappa B kinase subunit epsilon L homeolog

    See identical proteins and their annotated locations for NP_001089830.1

    Status: PROVISIONAL

    Source sequence(s)
    BC108511
    UniProtKB/TrEMBL
    Q32NR7
    Related
    ENSXLAP00005074045.1, ENSXLAT00005075612.1
    Conserved Domains (3) summary
    smart00220
    Location:9 → 243
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd12219
    Location:297 → 385
    UBL_TBK1_like; Ubiquitin-Like Domain Of Human Tbk1 and similar proteins
    cl21453
    Location:15 → 327
    PKc_like; Protein Kinases, catalytic domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054373.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    65979682..66014307 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018245337.2 → XP_018100826.1  inhibitor of nuclear factor kappa B kinase subunit epsilon L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A1L8HES5, A0A974HYH8
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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