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reep5.L receptor accessory protein 5 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734752, updated on 17-Aug-2024

Summary

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Official Symbol
reep5.L
Official Full Name
receptor accessory protein 5 L homeolog
Primary source
Xenbase:XB-GENE-944540
Locus tag
XELAEV_18008004mg
See related
EnsemblRapid:ENSXLAG00005029983
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
reep5
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Genomic context

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See reep5.L in Genome Data Viewer
Location:
chromosome: 1L
Exon count:
6
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 1L NC_054371.1 (187777861..187799961)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 1L NC_030724.1 (174629319..174651596)

Chromosome 1L - NC_054371.1Genomic Context describing neighboring genes Neighboring gene mutated in colorectal cancers L homeolog Neighboring gene decapping mRNA 2 L homeolog Neighboring gene signal recognition particle 19kDa L homeolog Neighboring gene adenomatous polyposis coli L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Protein interactomes of protein phosphatase 2A B55 regulatory subunits reveal B55-mediated regulation of replication protein A under replication stress. Wang F, et al. Sci Rep, 2018 Feb 8. PMID 29422626, Free PMC Article
  2. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  3. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

Interactions

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Products Interactant Other Gene Complex Source Pubs Description

General gene information

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Homology

Clone Names

  • MGC130879

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
receptor accessory protein 5 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096221.1 → NP_001089690.1  receptor accessory protein 5 L homeolog

    See identical proteins and their annotated locations for NP_001089690.1

    Status: PROVISIONAL

    Source sequence(s)
    BC106341
    UniProtKB/TrEMBL
    A0A974I4Z5, Q3KQ84
    Related
    ENSXLAP00005089771.1, ENSXLAT00005091446.1
    Conserved Domains (1) summary
    pfam03134
    Location:55 → 143
    TB2_DP1_HVA22; TB2/DP1, HVA22 family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054371.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    187777861..187799961
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041582974.1 → XP_041438908.1  receptor accessory protein 5 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J1MBD7
    Related
    ENSXLAP00005089619.1, ENSXLAT00005091289.1
    Conserved Domains (1) summary
    cl19882
    Location:4 → 144
    TB2_DP1_HVA22; TB2/DP1, HVA22 family
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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