gpn1.L GPN-loop GTPase 1 L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: gpn1.L
Official Full Name: GPN-loop GTPase 1 L homeolog
Primary source: Xenbase:XB-GENE-6255288
Locus tag: XELAEV_18028459mg
See related: EnsemblRapid:ENSXLAG00005022242
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as: gpn1; xab1; mbdin; ntpbp; atpbd1a
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Genomic context

Location:: chromosome: 5L

Exon count:: 14

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	5L	NC_054379.1 (170518957..170526868, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	5L	NC_030732.1 (159101719..159109695, complement)

Chromosome 5L - NC_054379.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables GTP binding	IEA Inferred from Electronic Annotation more info
enables GTPase activity	IEA Inferred from Electronic Annotation more info
enables hydrolase activity	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in cytoplasm	IEA Inferred from Electronic Annotation more info
located_in nucleus	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC734750

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096219.1 → NP_001089688.1 uncharacterized protein LOC734750

See identical proteins and their annotated locations for NP_001089688.1

Status: PREDICTED

Source sequence(s)

BC106338

UniProtKB/TrEMBL

A0A974CZH0, Q3KQ86

Related

ENSXLAP00005065392.1, ENSXLAT00005066908.1

Conserved Domains (2) summary

COG1100
Location:7 → 219

Gem1; GTPase SAR1 family domain [General function prediction only]

pfam03029
Location:14 → 254

ATP_bind_1; Conserved hypothetical ATP binding protein

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054379.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

170518957..170526868 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)