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MGC116527 uncharacterized protein MGC116527 [ Xenopus laevis (African clawed frog) ]

Gene ID: 734694, updated on 4-Nov-2022

Summary

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Gene symbol
MGC116527
Gene description
uncharacterized protein MGC116527
Locus tag
XELAEV_18001617mg
See related
EnsemblRapid:ENSXLAG00005036363
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See MGC116527 in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (130773846..130801232, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016694813.1 (5433143..5445084)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) Unplaced Scaffold NW_016709442.1 (485..754)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene transmembrane protease serine 9 Neighboring gene serine protease 27 Neighboring gene serine protease 27 Neighboring gene serine protease 27

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC734694

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096165.1 → NP_001089634.1  uncharacterized protein LOC734694 precursor

    See identical proteins and their annotated locations for NP_001089634.1

    Status: PREDICTED

    Source sequence(s)
    BC099332
    UniProtKB/TrEMBL
    Q4FZN4
    Related
    ENSXLAP00005108783.1, ENSXLAT00005110947.1
    Conserved Domains (2) summary
    smart00020
    Location:32 → 270
    Tryp_SPc; Trypsin-like serine protease
    cd00190
    Location:33 → 273
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    130773846..130801232 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_041575750.1 → XP_041431684.1  uncharacterized protein LOC734694 isoform X1

    UniProtKB/TrEMBL
    A0A8J1LQZ9
    Conserved Domains (1) summary
    cd00190
    Location:317 → 557
    Tryp_SPc; Trypsin-like serine protease; Many of these are synthesized as inactive precursor zymogens that are cleaved during limited proteolysis to generate their active forms. Alignment contains also inactive enzymes that have substitutions of the catalytic triad ...
Nucleotide Protein Strain
Heading Accession and Version

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