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stmn3.L stathmin 3 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734691, updated on 4-Nov-2024

Summary

Official Symbol
stmn3.L
Official Full Name
stathmin 3 L homeolog
Primary source
Xenbase:XB-GENE-5918448
Locus tag
XELAEV_18043631mg
See related
EnsemblRapid:ENSXLAG00005035035 AllianceGenome:Xenbase:XB-GENE-5918448
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
sclip; stmn3
Summary
Predicted to enable tubulin binding activity. Predicted to act upstream of or within microtubule depolymerization; neuron projection development; and regulation of microtubule polymerization or depolymerization. Predicted to be located in cytoplasm and neuron projection. [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

See stmn3.L in Genome Data Viewer
Location:
chromosome: 9_10L
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 9_10L NC_054387.1 (18505939..18512204)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 9_10L NC_030740.1 (18222404..18228669)

Chromosome 9_10L - NC_054387.1Genomic Context describing neighboring genes Neighboring gene traf2 and NCK-interacting protein kinase Neighboring gene TNF receptor superfamily member 6b L homeolog Neighboring gene regulator of telomere elongation helicase 1 L homeolog Neighboring gene helicase with zinc finger domain 2-like Neighboring gene uncharacterized LOC121398324 Neighboring gene glucocorticoid modulatory element binding protein 2 L homeolog

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC116514

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
stathmin 3 L homeolog
Names
stathmin-like 3

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096162.1NP_001089631.1  stathmin 3 L homeolog

    See identical proteins and their annotated locations for NP_001089631.1

    Status: PROVISIONAL

    Source sequence(s)
    BC099320
    UniProtKB/TrEMBL
    A0A974BX28, Q4KLA7
    Related
    ENSXLAP00005104716.1, ENSXLAT00005106747.1
    Conserved Domains (1) summary
    pfam00836
    Location:43174
    Stathmin; Stathmin family

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054387.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    18505939..18512204
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)