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a4gnt.L alpha-1,4-N-acetylglucosaminyltransferase L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734685, updated on 17-Aug-2024

Summary

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Official Symbol
a4gnt.L
Official Full Name
alpha-1,4-N-acetylglucosaminyltransferase L homeolog
Primary source
Xenbase:XB-GENE-5796042
Locus tag
XELAEV_18038374mg
See related
EnsemblRapid:ENSXLAG00005023598
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
a4gnt
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Genomic context

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See a4gnt.L in Genome Data Viewer
Location:
chromosome: 8L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 8L NC_054385.1 (6948272..6959989, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 8L NC_030738.1 (6826392..6838147, complement)

Chromosome 8L - NC_054385.1Genomic Context describing neighboring genes Neighboring gene small nucleolar RNA SNORD24 Neighboring gene ribosomal protein L7a L homeolog Neighboring gene mediator complex subunit 22 L homeolog Neighboring gene surfeit 6 L homeolog Neighboring gene ABO blood group (transferase A, alpha 1-3-N-acetylgalactosaminyltransferase; transferase B, alpha 1-3-galactosyltransferase) gene 2 L homeolog Neighboring gene histo-blood group ABO system transferase-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC116495

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables hexosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
  
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
  
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
alpha-1,4-N-acetylglucosaminyltransferase L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096156.1 → NP_001089625.1  alpha-1,4-N-acetylglucosaminyltransferase L homeolog precursor

    See identical proteins and their annotated locations for NP_001089625.1

    Status: PROVISIONAL

    Source sequence(s)
    BC099303
    UniProtKB/TrEMBL
    A0A974C647, Q4KLB8
    Related
    ENSXLAP00005069817.1, ENSXLAT00005071351.1
    Conserved Domains (2) summary
    pfam04572
    Location:202 → 326
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
    cl19952
    Location:65 → 177
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054385.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    6948272..6959989 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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