U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

tsnare1l.L t-SNARE domain containing 1 like L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734658, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
tsnare1l.L
Official Full Name
t-SNARE domain containing 1 like L homeolog
Primary source
Xenbase:XB-GENE-22065647
Locus tag
XELAEV_18030506mg
See related
EnsemblRapid:ENSXLAG00005028781 AllianceGenome:Xenbase:XB-GENE-22065647
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See tsnare1l.L in Genome Data Viewer
Location:
chromosome: 6L
Exon count:
4
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 6L NC_054381.1 (5207432..5212802, complement)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 6L NC_030734.1 (2790851..2796221, complement)

Chromosome 6L - NC_054381.1Genomic Context describing neighboring genes Neighboring gene Zinc finger family member 783 L homeolog (provisional) Neighboring gene zinc finger protein 208 L homeolog Neighboring gene zinc finger protein 665-like L homeolog Neighboring gene uncharacterized LOC108718652

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC115694

General protein information

Go to the top of the page Help
Preferred Names
uncharacterized protein LOC734658

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096132.1 → NP_001089601.1  uncharacterized protein LOC734658

    See identical proteins and their annotated locations for NP_001089601.1

    Status: PREDICTED

    Source sequence(s)
    BC099057
    UniProtKB/TrEMBL
    A0A974CM26, Q4KLQ0
    Related
    ENSXLAP00005085745.1, ENSXLAT00005087408.1
    Conserved Domains (1) summary
    pfam13873
    Location:101 → 179
    Myb_DNA-bind_5; Myb/SANT-like DNA-binding domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054381.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    5207432..5212802 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials