U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

gxylt1.L glucoside xylosyltransferase 1 L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734649, updated on 4-Nov-2024

Summary

Go to the top of the page Help
Official Symbol
gxylt1.L
Official Full Name
glucoside xylosyltransferase 1 L homeolog
Primary source
Xenbase:XB-GENE-5868100
Locus tag
XELAEV_18017610mg
See related
EnsemblRapid:ENSXLAG00005003354 AllianceGenome:Xenbase:XB-GENE-5868100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
glt8d3; gxylt1
Summary
Predicted to enable UDP-xylosyltransferase activity. Predicted to act upstream of or within O-glycan processing. Predicted to be located in membrane. Orthologous to human GXYLT1 (glucoside xylosyltransferase 1). [provided by Alliance of Genome Resources, Nov 2024]
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See gxylt1.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
8
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (71530941..71554347)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (56211438..56234973)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene periphilin 1 L homeolog Neighboring gene zinc finger CCHC-type and RNA binding motif containing 1 L homeolog Neighboring gene YY1 associated factor 2 L homeolog Neighboring gene PDZ domain containing ring finger 4 L homeolog Neighboring gene contactin 1 L homeolog

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC115517

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables UDP-glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables UDP-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within O-glycan processing IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
glucoside xylosyltransferase 1 L homeolog
NP_001089592.1
XP_018106717.1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096123.1 → NP_001089592.1  glucoside xylosyltransferase 1 L homeolog

    See identical proteins and their annotated locations for NP_001089592.1

    Status: PROVISIONAL

    Source sequence(s)
    BC099025
    UniProtKB/TrEMBL
    Q4KLS1
    Related
    ENSXLAP00005009985.1, ENSXLAT00005010144.1
    Conserved Domains (2) summary
    COG1442
    Location:1 → 230
    RfaJ; Lipopolysaccharide biosynthesis protein, LPS:glycosyltransferase [Cell wall/membrane/envelope biogenesis]
    cl11394
    Location:1 → 301
    Glyco_tranf_GTA_type; Glycosyltransferase family A (GT-A) includes diverse families of glycosyl transferases with a common GT-A type structural fold

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    71530941..71554347
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018251228.2 → XP_018106717.1  glucoside xylosyltransferase 1 L homeolog isoform X1

    UniProtKB/TrEMBL
    A0A8J0UNZ5, A0A974HT58
    Related
    ENSXLAP00005009990.1, ENSXLAT00005010149.1
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.