lman2l.L lectin, mannose-binding 2-like L homeolog [Xenopus laevis (African clawed frog)] - Gene

Summary

Official Symbol: lman2l.L
Official Full Name: lectin, mannose-binding 2-like L homeolog
Primary source: Xenbase:XB-GENE-17338505
Locus tag: XELAEV_18018585mg
See related: EnsemblRapid:ENSXLAG00005000882
Gene type: protein coding
RefSeq status: PREDICTED
Organism: Xenopus laevis
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

Location:: chromosome: 3L

Exon count:: 9

Annotation release	Status	Assembly	Chr	Location
101	current	Xenopus_laevis_v10.1 (GCF_017654675.1)	3L	NC_054375.1 (132917021..132927396, complement)
100	previous assembly	Xenopus_laevis_v2 (GCF_001663975.1)	3L	NC_030728.1 (117544956..117555251, complement)

Chromosome 3L - NC_054375.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by Xenbase

Function	Evidence Code	Pubs
enables D-mannose binding	IEA Inferred from Electronic Annotation more info

Process	Evidence Code	Pubs
acts_upstream_of_or_within endoplasmic reticulum to Golgi vesicle-mediated transport	IEA Inferred from Electronic Annotation more info

Component	Evidence Code	Pubs
located_in COPII-coated ER to Golgi transport vesicle	IEA Inferred from Electronic Annotation more info
located_in Golgi membrane	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum membrane	IEA Inferred from Electronic Annotation more info
located_in endoplasmic reticulum-Golgi intermediate compartment	IEA Inferred from Electronic Annotation more info
located_in membrane	IEA Inferred from Electronic Annotation more info

General protein information

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Preferred Names: uncharacterized protein LOC734646

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001096120.1 → NP_001089589.1 uncharacterized protein LOC734646

See identical proteins and their annotated locations for NP_001089589.1

Status: PREDICTED

Source sequence(s)

BC099020

UniProtKB/TrEMBL

A0A974DF58, Q4KLS5

Related

ENSXLAP00005002636.1, ENSXLAT00005002688.1

Conserved Domains (1) summary

cd06901
Location:45 → 293

lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

Range

132917021..132927396 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_041585261.1 → XP_041441195.1 uncharacterized protein LOC734646 isoform X1

UniProtKB/TrEMBL

A0A8J1MJI0, A0A974DF58

Related

ENSXLAP00005002635.1, ENSXLAT00005002687.1

Conserved Domains (1) summary

cd06901
Location:45 → 304

lectin_VIP36_VIPL; VIP36 and VIPL type 1 transmembrane proteins, lectin domain