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MGC115706 uncharacterized protein MGC115706 [ Xenopus laevis (African clawed frog) ]

Gene ID: 734618, updated on 10-Mar-2023

Summary

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Gene symbol
MGC115706
Gene description
uncharacterized protein MGC115706
Locus tag
XELAEV_18036028mg
See related
EnsemblRapid:ENSXLAG00005021893
Gene type
protein coding
RefSeq status
PREDICTED
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
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Genomic context

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See MGC115706 in Genome Data Viewer
Location:
chromosome: 7L
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 7L NC_054383.1 (114992334..115001240)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 7L NC_030736.1 (104467888..104476770)

Chromosome 7L - NC_054383.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121395621 Neighboring gene apolipoprotein C-II L homeolog Neighboring gene trypsin-3 Neighboring gene trypsin-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
uncharacterized protein LOC734618

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096093.1 → NP_001089562.1  uncharacterized protein LOC734618

    See identical proteins and their annotated locations for NP_001089562.1

    Status: PREDICTED

    Source sequence(s)
    BC097907
    UniProtKB/TrEMBL
    Q4V7H6
    Conserved Domains (1) summary
    PRK10811
    Location:165 → 326
    rne; ribonuclease E; Reviewed

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054383.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    114992334..115001240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_018224624.2 → XP_018080113.1  uncharacterized protein LOC734618 isoform X1

    UniProtKB/TrEMBL
    A0A1L8FN95, A0A974CGN4
    Related
    ENSXLAP00005064314.1, ENSXLAT00005065828.1
    Conserved Domains (3) summary
    PRK10811
    Location:165 → 321
    rne; ribonuclease E; Reviewed
    pfam03154
    Location:5 → 287
    Atrophin-1; Atrophin-1 family
    pfam04749
    Location:367 → 391
    PLAC8; PLAC8 family

  2. XM_018224625.2 → XP_018080114.1  uncharacterized protein LOC734618 isoform X2

    UniProtKB/TrEMBL
    A0A8J0T8Q6
    Related
    ENSXLAP00005064317.1, ENSXLAT00005065831.1

  3. XM_041568582.1 → XP_041424516.1  uncharacterized protein LOC734618 isoform X1

    UniProtKB/TrEMBL
    A0A1L8FN95, A0A974CGN4
    Related
    ENSXLAP00005064294.1, ENSXLAT00005065808.1
    Conserved Domains (3) summary
    PRK10811
    Location:165 → 321
    rne; ribonuclease E; Reviewed
    pfam03154
    Location:5 → 287
    Atrophin-1; Atrophin-1 family
    pfam04749
    Location:367 → 391
    PLAC8; PLAC8 family
Nucleotide Protein Strain
Heading Accession and Version

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