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mesd.L mesoderm development LRP chaperone L homeolog [ Xenopus laevis (African clawed frog) ]

Gene ID: 734603, updated on 4-Nov-2024

Summary

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Official Symbol
mesd.L
Official Full Name
mesoderm development LRP chaperone L homeolog
Primary source
Xenbase:XB-GENE-940837
Locus tag
XELAEV_18018335mg
See related
EnsemblRapid:ENSXLAG00005024169 AllianceGenome:Xenbase:XB-GENE-940837
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus laevis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus
Also known as
boca; mesdc2; mesdc2.L
Summary
Predicted to act upstream of or within protein folding. Predicted to be located in endoplasmic reticulum. Human ortholog(s) of this gene implicated in osteogenesis imperfecta type 20. Orthologous to human MESD (mesoderm development LRP chaperone). [provided by Alliance of Genome Resources, Nov 2024]
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Genomic context

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See mesd.L in Genome Data Viewer
Location:
chromosome: 3L
Exon count:
3
Annotation release Status Assembly Chr Location
101 current Xenopus_laevis_v10.1 (GCF_017654675.1) 3L NC_054375.1 (114510077..114514001)
100 previous assembly Xenopus_laevis_v2 (GCF_001663975.1) 3L NC_030728.1 (99074602..99078526)

Chromosome 3L - NC_054375.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 161 L homeolog Neighboring gene talin rod domain containing 1 L homeolog Neighboring gene cell migration inducing hyaluronidase 1 L homeolog Neighboring gene cell surface hyaluronidase Neighboring gene abhydrolase domain containing 17C L homeolog

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Clone Names

  • MGC115616

Gene Ontology Provided by Xenbase

Process Evidence Code Pubs
acts_upstream_of_or_within protein folding IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
mesoderm development LRP chaperone L homeolog
Names
mesoderm development candidate 2 L homeolog

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001096078.1 → NP_001089547.2  mesoderm development LRP chaperone L homeolog precursor

    Status: PROVISIONAL

    Source sequence(s)
    BC097859
    UniProtKB/TrEMBL
    A0A1L8H0X7, A0A974HTW4, Q4V7K5
    Related
    ENSXLAP00005071555.1, ENSXLAT00005073102.1
    Conserved Domains (1) summary
    pfam10185
    Location:34 → 189
    Mesd; Chaperone for wingless signalling and trafficking of LDL receptor

RefSeqs of Annotated Genomes: Xenopus laevis Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Xenopus_laevis_v10.1 Primary Assembly

Genomic

  1. NC_054375.1 Reference Xenopus_laevis_v10.1 Primary Assembly

    Range
    114510077..114514001
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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